Publications

    All our publications on Pubmed

    Tatu J.K. Haataja, Rafael C. Bernardi, Simon Lecointe, Romain Capoulade, Jean Merot, Ulla Pentikäinen

    Non-syndromic mitral valve dysplasia mutation changes the force resilience and interaction of human Filamin A

    Structure, 2019, 27: 1-11.

    Jonne Seppälä, Rafael C Bernardi, Tatu Haataja, Maarit Hellman, Olli T Pentikäinen, Klaus Schulten, Perttu Permi, Jari Ylänne, Ulla Pentikäinen

    Skeletal Dysplasia Mutations Effect on Human Filamins’ Structure and Mechanosensing

    Scientific Reports, 2017, 7: 4218

     

    Jonne Seppälä, Helena Tossavainen, Neboja Rodic, Perttu Permi, Ulla Pentikäinen*, Jari Ylänne*

    Flexible Structure of Peptide Bound Filamin A Mechanosensor Domain Pair 20-21

    PLoS One, 2015, 10(8):e0136969

     

    Ritika Sethi, Jonne Seppälä, Helena Tossavainen, Mikko Ylilauri, Salla Ruskamo, Olli Pentikäinen, Ulla Pentikäinen, Perttu Permi, Jari Ylänne

    A Novel Structural Unit in the N-terminal Region of Filamins

    Journal of Biological Chemistry, 2014, 289, 8588-8598

     

    Mikko Ylilauri, Elina Mattila, Elisa M. Nurminen, Jarmo Käpylä, Sanna P. Niinivehmas,

    Juha A. Määttä JA, Ulla Pentikäinen, Johanna Ivaska, Olli T. PentikäinenMolecular mechanism of T-cell protein tyrosine phosphatase (TCPTP) activation by mitoxantrone

    Biochim Biophys Acta. 2013,1834, 1988-1997

     

    Salla Ruskamo, Robert Gilbert, Gregor Hofmann, Pengju Jiang, Iain D. Cambell, Jari

    Ylänne, Ulla Pentikäinen

    The C-terminal rod 2 fragment of filamin A forms a compact structure that can be extended

    Biochemical Journal, 2012, 446, 261-269

     

    Ulla Pentikäinen, Pengju Jiang, Heikki Takala, Salla Ruskamo, Iain D Campbell, Jari Ylänne

    Assembly of a Filamin Four-domain Fragment and the Influence of Splicing Variant-1 on the Structure

    Journal of Biological Chemistry, 2011, 286, 26921-26930

     

    Elisa Nurminen, Marjo Pihlavisto, László Lázár, Ulla Pentikäinen, Ferenc Fülöp, Olli Pentikäinen

    Novel Hydrazine Molecules as Tools To Understand the Flexibility of Vascular Adhesion Protein-1 Ligand-Binding Site: Toward More Selective Inhibitors

    Journal of Medicinal Chemistry, 2011, 54, 2143-2154

     

    Elisa Nurminen, Marjo Pihlavisto, László Lázár,  Zsolt Szakonyi, Ulla Pentikäinen, Ferenc  Fülöp, Olli Pentikäinen

     Synthesis, in vitro activity, and three-dimensional quantitative structure-activity relationship of novel hydrazine inhibitors of human Vascular Adhesion Protein-1

    Journal of Medicinal Chemistry, 2010, 53, 6301-6315

     

    Ulla Pentikäinen ja Jari Ylänne

    The regulation mechanism for the auto-inhibition of binding of human filamin A to integrin

    Journal of Molecular Biology, 2009, 393, 644-657

     

    Ulla Pentikäinen, Katherine Shaw, Kittusamy Senthilkumar, Christopher Woods, Adrian

    Mulholland

    Lennard-Jones parameters for B3LYP-CHARMM27 QM/MM modelling of Nucleic Acid Bases

    Journal of Chemical Theory and Computation, 2009, 5, 396–410

     

    Ulla Pentikäinen, Olli T. Pentikäinen, Adrian J. Mulholland

    Cooperative symmetric to asymmetric conformational transition of the apo-form of 

    scavenger decapping enzyme revealed by simulations

    Proteins, Structure, Function and Bioinformatics, 2008, 70, 498-508

     

    Fumiko Marttila-Ichihara, David J. Smith, Craig. Stolen, Gennady. Yegutkin, Kati. Elima, Nathalie. Mercier, Marika Merinen, Riku  Kiviranta, Marjo Pihlavisto, Sakari Alaranta, Ulla Pentikäinen, Olli T. Pentikäinen, Ferenc Fülöp, Sirpa  Jalkanen, Marko Salmi

    Vascular amine oxidases are needed for leukocyte extravasation into inflamed joints in vivo.

    Arthritis & Rheumatism, 2006, 54, 2852-62.

     

    James M. Sanders, Olli T. Pentikäinen, Luca Settimo,  Ulla Pentikäinen, Muneo Shoji, Makoto Sasaki, Ryuichi Sakai, Mark S. Johnson, and Geoffrey T. Swanson

    Determination of binding site residues responsible for the subunit selectivity of novel marine-derived compounds on kainate receptors.

    Molecular Pharmacology, 2006, 69, 1849-1860.

     

    Ulla Pentikäinen, Luca Settimo,  Mark S. Johnson, Olli T. Pentikäinen

    Subtype selectivity and flexibility of ionotropic glutamate receptors upon antagonist ligand binding.

    Organic and Biomolecular Chemistry, 2006, 4, 1058-1070