Instruments
Mass Spectrometers
Orbitrap Exploris 480

With the FAIMS Pro Duo interface for Enhanced LC/MS instrument selectivity and detection limits.
Orbitrap Fusion Lumos Mass Spectrometer

With ETD and UVPD fragmentation techniques for top-down proteomics.
With the FAIMS Pro interface for Enhanced LC/MS instrument selectivity and detection limits.
Q Exactive HF Mass Spectrometer

ESI-hybrid quadrupole-orbitrap (Thermo Scientific)
TSQ Vantage

ESI-triple stage quadrupole (Thermo Scientific)
for targeted protein quantitation (SRM).
Chromatography
EASY-nLC 1200/1000

A dedicated nano LC system for proteomic analyses.
Evosep One

UHPLC instrument for robust and high throughput proteomics.
Agilent 1260 Infinity

Liquid chromatography system for offline peptide separations.
ZipChip

Microchip capillary electrophoresis device for mass spectrometry.
Data Processing and Analysis Computers
Turku Proteomics Facility has three open access workstations.
Available software licences:
- Proteome Discoverer 3.0 with
- Chimerys Intelligent Search Algorithm
- Mascot 2.8 Server
- Spectronaut 18
- Spectrodive 11