Data Storage and Analysis

    Data Storage

    Currently, the Turku Bioimaging provides OMERO as a data storage service for CIC customers. Please contact microscopy@bioscience.fi for further information.

    Data Processing and Analysis

    The CIC has two open access workstations which are available via Open IRIS reservation system. The most common non-commercial image analysis software (e.g. FIJI-ImageJ, QuPath, Ilastik, Icy, Cellprofiler) together with Anaconda3, RStudio and Matlab are installed in computers. The available commercial software include

      • Arivis Vision4D 3.5
      • Huygens Professional
      • Imaris 10.2.0 Confocal full
      • AZtec