Selected Publications using the services of the Turku Proteomics Facility

2023

Pavic, K., Gupta, N., Omella, J.D., Derua, R., Aakula, A., Huhtaniemi, R., Määttä, J.A., Höfflin, N., Okkeri, J., Wang, Z., Kauko, O., Varjus, R., Honkanen, H., Abankwa, D., Köhn, M., Hytönen, V.P., Xu, W., Nilsson, J., Page, R., Janssens V., Leitner, A., Westermarck, J. Structural mechanism for inhibition of PP2A-B56α and oncogenicity by CIP2A. Nature Communications 14, 1143 (2023). https://doi.org/10.1038/s41467-023-36693-9. PMID: 36854761

Vaparanta, K., Jokilammi, A., Paatero, I., Merilahti, J.A.M., Heliste, J., Hemanthakumar, K.A., Kivelä, R., Alitalo, K., Taimen, P., Elenius K. STAT5b is a key effector of NRG-1/ERBB4-mediated myocardial growth. EMBO Reports 24, e56689 (2023). https://doi.org/10.15252/embr.202256689. PMID: 37009825

Moulder, R., Välikangas, T., Hirvonen, M.K., Suomi, T., Brorsson, C.A., Lietzén, N., Bruggraber, S.F.A., Overbergh, L., Dunger, D.B., Peakman, M., Chmura, P.J., Brunak, S., Schulte, A.M., Mathieu C., Knip, M., Elo, L.L., Lahesmaa, R. Targeted serum proteomics of longitudinal samples from newly diagnosed youth with type 1 diabetes distinguishes markers of disease and C-peptide trajectory. Diabetologia (2023). https://doi.org/10.1007/s00125-023-05974-9

2022

Vaparanta, K., Jokilammi, A., Tamirat, M., Merilahti, J.A.M., Salokas K., Varjosalo, M., Ivaska, J., Johnson, M.S., Elenius, K. An extracellular receptor tyrosine kinase motif orchestrating intracellular STAT activation. Nature Communications 13, 6953 (2022). https://doi.org/10.1038/s41467-022-34539-4. PMID: 36376313

Ankitha, S., Tripathi, S.K., Junttila, S., Buchacher, T., Biradar, R., Bhosale, S.D., Envall, T., Laiho, A., Moulder, R., Rasool, O., Galande, S., Elo, L.L., Lahesmaa, R. A systematic comparison of FOSL1, FOSL2 and BATF-mediated transcriptional regulation during early human Th17 differentiation, Nucleic Acids Research 50, 9, (2022), 4938–4958, https://doi.org/10.1093/nar/gkac256. PMID: 35511484

Gerotto, C., Trotta, A., Bajwa, A.A., Morosinotto, T., Aro, E-A. Role of serine/threonine protein kinase STN7 in the formation of two distinct photosystem I supercomplexes in Physcomitrium patens, Plant Physiology, 190, 1, (2022), 698–713, https://doi.org/10.1093/plphys/kiac294. PMID: 35736511

2021

Virtakoivu, R., Rannikko, J.H., Viitala, M., Vaura, F., Takeda, A., Lönnberg, T., Koivunen, J., Jaakkola, P., Pasanen, A., Shetty, de Jonge, M.J.A., Robbrecht, D., Ma, Y.T., Skyttä, T., Minchom, A., Jalkanen, S., Karvonen, M.K., Mandelin, J., Bono, P., Hollmén., M. Systemic Blockade of Clever-1 Elicits Lymphocyte Activation Alongside Checkpoint Molecule Downregulation in Patients with Solid Tumors: Results from a Phase I/II Clinical Trial. Clinical Cancer Research 27, 15, (2021), 4205–4220. https://doi.org/10.1158/1078-0432.CCR-20-4862. PMID: 34078651

Pascual J, Rahikainen M, Angeleri M, Alegre S, Gossens R, Shapiguzov A, Heinonen A, Trotta A, Durian G, Winter Z, Sinkkonen J, Kangasjärvi J, Whelan J, Kangasjärvi S. ACONITASE 3 is part of theANAC017 transcription factor-dependent mitochondrial dysfunction response. Plant Physiology 186, 4, (2021), 1859-1877. https://doi.org/10.1093/plphys/kiab225. PMID: 34618107.

van der Kolk BW, Muniandy M, Kaminska D, Alvarez M, Ko A, Miao Z, Valsesia A, Langin D, Vaittinen M, Pääkkönen M, Jokinen R, Kaye S, Heinonen S, Virtanen KA, Andersson DP, Männistö V, Saris WH, Astrup A, Rydén M, Blaak EE, Pajukanta P, Pihlajamäki J, Pietiläinen KH. Differential Mitochondrial Gene Expression in Adipose Tissue Following Weight Loss Induced by Diet or Bariatric Surgery. Journal of Clinical Endocrinology and Metabolism 106, 5, (2021), 1312-1324. https://doi.org/10.1210/clinem/dgab072. PMID: 33560372.